Io.NativeQTFormat$Parser.typedParse(NativeQTFormat.java:351)Īt io.(AbstractParser.java:253)Īt io.(AbstractParser.java:336)Īt io.(AbstractParser.java:52)Īt io.(AbstractReader.java:270) Io.NativeQTFormat$Parser.typedParse(NativeQTFormat.java:371) Io.NativeQTFormat$NativeQTUtils.access$100(NativeQTFormat.java:1253) Io.NativeQTFormat$NativeQTUtils.parse(NativeQTFormat.java:1283) Io.NativeQTFormat$NativeQTUtils.parse(NativeQTFormat.java:1401) Io.(DefaultInitializeService.java:90)Īt io.(ImgOpener.java:547)Ĭaused by: io.scif.UnsupportedCompressionException: Unsupported codec: avc1 Io.(DefaultDatasetIOService.java:123)Ĭaused by: java.io.IOException: io.scif.UnsupportedCompressionException:Īt io.(AbstractReader.java:274) interceptRunPlugIn(DefaultLegacyHooks.java:152)Īt ij.nCommand(Executer.java:131)Ĭaused by: io.: java.io.IOException:Īt io.(ImgOpener.java:556)Īt io.(ImgOpener.java:146) interceptFileOpen(DefaultLegacyHooks.java:329) DefaultLegacyOpener.open(DefaultLegacyOpener.java:135) Io.(DefaultDatasetIOService.java:109)Īt io.scif.io.DatasetIOPlugin.open(DatasetIOPlugin.java:75)Īt io.scif.io.DatasetIOPlugin.open(DatasetIOPlugin.java:50) Io.scif.UnsupportedCompressionException: Unsupported codec: avc1 Java.io.IOException: io.: java.io.IOException: I attempt to import, instead of open, I also get an The console, along with an additional dialogue box. Next message: New: Error in Fiji ImageJ : invalid range properties.Previous message: 3D viewer - download problem for latest 3D java.If I attempt to import, instead of open, I also get an error message. I get this error in the console, along with an additional dialogue box. For test.rar (164.9 KB) I think the problem is not related to the image file.New: I am unable to open. The folder I used for testing is just a combination of two files, the h5 file and the screenshot file (png) of the exception window, which are both attached in my last reply. h5 files, so I put it in rar), no garbled text window will appear, instead, the software shows “Initializing base reader” for a while, and then throws nothing but the Exception window as I attached above. So I think the problem may not lie in the ImageJ version.Īs for the garbled text window, I agree with you that Fiji doesn’t recognize the file. However, if I updated the whole software through Help > Update…, the problem appeared. ![]() I updated it to 1.53i via Help > Update ImageJ, it worked fine. As I mentioned, the latest normal version of Fiji (for my usage) is 20200721-1931, in which the ImageJ version is 1.52p. I think it is important to get sorted out all bugs related to image import as that is essential functionality.Īctually I have tested the ImageJ version of Fiji. Try to reduce the folder to a minimum content that will still crash for you zip that folder, and post it here to see if we can reproduce the problem. I cannot reproduce your problem in getting an exception probably it is the combination of file types in the folder that causes the problem. Apparently, ImageJ does not recognize the file properly and shows it as a text window. The “garbled text” you see is apparently the contents of the “hdf5 file.rar”, which is shown as a separate window. You do this via menu “Help” → “Update ImageJ”. So the first thing you should try is to update the ImageJ version bundled with Fiji. The new dialog (1.53f) has greatly improved functionality compared to the old one (1.53c). It has been working fine since version 1.53f8, at least for me. These problems were fixed during version 1.53e (September 2020) and 1.53f (October 2020). The Image Sequence dialog was replaced by a new dialog (allowing drag-and-drop of filename) in ImageJ version 1.53d (August 2020) and this change introduced several problems.
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